BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB008C05SP1|AL425829
(795 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1378 1543 0.0
>3x_Contig1378
Length = 8604
Score = 1543 bits (774), Expect = 0.0
Identities = 781/788 (99%)
Strand = Plus / Minus
Query: 8 tggagaataagamacgtccttagcgaacgagactgggcattcaagatagcgaatgagaaa 67
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1573 tggagaataagacacgtccttagcgaacgagactgggcattcaagatagcgaatgagaaa 1514
Query: 68 tttgctgttgaaaaamaagtatttatcgaatcattcgaaaaagactttttagaagctcct 127
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1513 tttgctgttgaaaaacaagtatttatcgaatcattcgaaaaagactttttagaagctcct 1454
Query: 128 gctaacgaagatgaagagattttcgaatcattgcaacgttttcaatatgccatatacggt 187
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1453 gctaacgaagatgaagagattttcgaatcattgcaacgttttcaatatgccatatacggt 1394
Query: 188 atctctgagtacatcgatgagaacaaagtggacagaacatttgtggatggattgaaagcg 247
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1393 atctctgagtacatcgatgagaacaaagtggacagaacatttgtggatggattgaaagcg 1334
Query: 248 gttgcaamattgaagttaaagaaatttgcactaagaaacgaggacatcaagaacttttta 307
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1333 gttgcaacattgaagttaaagaaatttgcactaagaaacgaggacatcaagaacttttta 1274
Query: 308 gaagaatctaacaatamaattgtggatgcaggtgaatccttccttctgtatacatcagaa 367
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1273 gaagaatctaacaatacaattgtggatgcaggtgaatccttccttctgtatacatcagaa 1214
Query: 368 aacacagaatctgccawcgcagaagcatgtcaagcggtaagggagtkgagagaaaatggc 427
|||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 1213 aacacagaatctgccatcgcagaagcatgtcaagcggtaagggagttgagagaaaatggc 1154
Query: 428 tcctctgtgtctagatamgatgaattggaaactgttcaagaatatgttaataaattagct 487
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1153 tcctctgtgtctagatacgatgaattggaaactgttcaagaatatgttaataaattagct 1094
Query: 488 gaggctcaaatggcaaaggtaacagaagcggaaatacagctgcaagaagaagatgcaaaa 547
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1093 gaggctcaaatggcaaaggtaacagaagcggaaatacagctgcaagaagaagatgcaaaa 1034
Query: 548 aacaacgctaatacactatgatattaatgccatcgaagtgattgtataaagagataagtg 607
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1033 aacaacgctaatacactatgatattaatgccatcgaagtgattgtataaagagataagtg 974
Query: 608 taaccgtccatttggatgaacccagccttcctgtacatatgtatacaccaacttaaataa 667
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 973 taaccgtccatttggatgaacccagccttcctgtacatatgtatacaccaacttaaataa 914
Query: 668 cggaatataaaacaaaaaatttccttcgacaacactttaatttgacgaataagaattgta 727
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 913 cggaatataaaacaaaaaatttccttcgacaacactttaatttgacgaataagaattgta 854
Query: 728 tttaaagagagttttatttgcagtcaattaattcaatagacctttttagccttttttacc 787
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 853 tttaaagagagttttatttgcagtcaattaattcaatagacctttttagccttttttacc 794
Query: 788 gctctccg 795
||||||||
Sbjct: 793 gctctccg 786
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6505
Number of Sequences: 1807
Number of extensions: 6505
Number of successful extensions: 48
Number of sequences better than 1.0e-20: 1
length of query: 795
length of database: 10,358,551
effective HSP length: 16
effective length of query: 779
effective length of database: 10,329,639
effective search space: 8046788781
effective search space used: 8046788781
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.2 bits)